Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methyltransferaseL904_00100Not AvailableNegative20019 - 2103536754.0
polynucleotide phosphorylaseL904_00105Not AvailableNegative21170 - 2331777665.2
30s ribosomal protein s15L904_00110Not AvailableNegative23594 - 2386310094.2
trna pseudouridine synthase bL904_00115Not AvailableNegative24027 - 2497434786.6
ribosome-binding factor aL904_00120Not AvailableNegative24978 - 2535814443.3
hypothetical proteinL904_00125Not AvailableNegative25396 - 2582715840.9
translation initiation factor if-2L904_00130Not AvailableNegative25831 - 2856699085.1
dna-binding proteinL904_00135Not AvailableNegative28669 - 2937025046.1
transcription elongation factor nusaL904_00140Not AvailableNegative29367 - 3098360224.1
ribosome maturation factor rimpL904_00145Not AvailableNegative31047 - 3164322013.2

Displaying genes 221 – 230 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.