Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. LY4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140381 bp
Thymine Count
1126363 bp
Guanine Count
1677813 bp
Cytosine Count
1697653 bp
Genome Length
5642210 bp
Protein-coding Genes
5200 genes
Non-Coding Genes
173 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | L904_21940 | Not Available | Negative | 2169018 - 2169725 | 26500.8 |
| hrp-dependent type iii effector protein | L904_21945 | Not Available | Negative | 2169730 - 2170770 | 35417.9 |
| carboxylate-amine ligase | L904_21950 | Not Available | Negative | 2171004 - 2173247 | 81418.5 |
| acyl-coa hydrolase | L904_21955 | Not Available | Negative | 2173418 - 2173807 | 14265.2 |
| hypothetical protein | L904_21960 | Not Available | Positive | 2173942 - 2174175 | 8798.59 |
| abc transporter | L904_21965 | Not Available | Negative | 2174207 - 2176015 | 66103.2 |
| imp dehydrogenase | L904_21970 | Not Available | Positive | 2176308 - 2179634 | 123272.0 |
| hypothetical protein | L904_21975 | Not Available | Positive | 2179636 - 2182041 | 89348.7 |
| transglutaminase | L904_21980 | Not Available | Positive | 2182046 - 2182924 | 32194.6 |
| hypothetical protein | L904_21985 | Not Available | Positive | 2183093 - 2184331 | 44084.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
