Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. LY4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140381 bp
Thymine Count
1126363 bp
Guanine Count
1677813 bp
Cytosine Count
1697653 bp
Genome Length
5642210 bp
Protein-coding Genes
5200 genes
Non-Coding Genes
173 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | L904_21570 | Not Available | Negative | 2090090 - 2090929 | 29682.5 |
| amino acid abc transporter permease | L904_21575 | Not Available | Negative | 2090971 - 2091621 | 23070.7 |
| abc transporter permease | L904_21580 | Not Available | Negative | 2091632 - 2092300 | 24111.3 |
| hypothetical protein | L904_21585 | Not Available | Negative | 2092597 - 2092731 | 4818.73 |
| 3-carboxy-cis,cis-muconate cycloisomerase | L904_21590 | Not Available | Negative | 2092773 - 2093834 | 37415.8 |
| protocatechuate 3,4-dioxygenase subunit alpha | L904_21595 | Not Available | Negative | 2093903 - 2094523 | 22845.0 |
| protocatechuate 3,4-dioxygenase subunit beta | L904_21600 | Not Available | Negative | 2094526 - 2095266 | 27783.4 |
| 4-carboxymuconolactone decarboxylase | L904_21605 | Not Available | Negative | 2095263 - 2095712 | 16214.0 |
| 3-oxoadipate enol-lactonase | L904_21610 | Not Available | Negative | 2095716 - 2096513 | 28451.1 |
| lysr family transcriptional regulator | L904_21615 | Not Available | Positive | 2096608 - 2097549 | 33776.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
