Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutathione abc transporter atp-binding proteinL904_21520Not AvailableNegative2081669 - 208348966728.3
hypothetical proteinL904_21525Not AvailableNegative2083486 - 20835903629.18
hypothetical proteinL904_21530Not AvailableNegative2083628 - 20837654528.19
antibiotic biosynthesis monooxygenaseL904_21535Not AvailablePositive2083970 - 208427811693.9
3-keto-5-aminohexanoate cleavage proteinL904_21540Not AvailableNegative2084356 - 208629371305.2
tetr family transcriptional regulatorL904_21545Not AvailablePositive2086377 - 208706926266.4
3-dehydroquinate dehydrataseL904_21550Not AvailableNegative2087044 - 208748716223.2
shikimate dehydrogenaseL904_21555Not AvailableNegative2087484 - 208835931497.1
arginine abc transporter atp-binding proteinL904_21560Not AvailableNegative2088426 - 208919928493.7
abc transporter substrate-binding proteinL904_21565Not AvailableNegative2089215 - 209005429782.6

Displaying genes 2131 – 2140 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.