Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ap endonucleaseL904_20740Not AvailableNegative1902375 - 190344539808.8
sn-glycerol-3-phosphate abc transporter atp-binding proteinL904_20745Not AvailableNegative1903572 - 190464538401.6
thiamine abc transporter atp-binding proteinL904_20750Not AvailableNegative1904663 - 190548430616.4
sugar abc transporter permeaseL904_20755Not AvailableNegative1905504 - 190644234431.9
abc transporter substrate-binding proteinL904_20760Not AvailableNegative1906511 - 190781246188.6
rok family transcriptional regulatorL904_20765Not AvailablePositive1908032 - 190920741634.3
oxidoreductaseL904_20770Not AvailablePositive1909261 - 191036138784.5
hypothetical proteinL904_20775Not AvailablePositive1910395 - 191103623957.4
hypothetical proteinL904_20780Not AvailableNegative1911210 - 191256847167.7
diguanylate phosphodiesteraseL904_20785Not AvailablePositive1912912 - 191523084095.5

Displaying genes 1981 – 1990 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.