Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transporterL904_19220Not AvailableNegative1641511 - 164378484466.7
type iv secretion protein virb3L904_19225Not AvailableNegative1643885 - 164422612679.7
virb2 type iv secretion proteinL904_19230Not AvailableNegative1644229 - 164452810455.4
virb1 type iv secretion proteinL904_19235Not AvailableNegative1644525 - 164521124763.2
hypothetical proteinL904_19240Not AvailableNegative1645214 - 16453093637.46
transcriptional regulatorL904_19245Not AvailablePositive1645847 - 164620012985.8
hypothetical proteinL904_19250Not AvailableNegative1646197 - 164661615620.2
hypothetical proteinL904_19255Not AvailablePositive1646853 - 164808845805.6
hypothetical proteinL904_19260Not AvailablePositive1648196 - 164908332696.4
replication initiation proteinL904_19265Not AvailablePositive1649238 - 165044943666.6

Displaying genes 1751 – 1760 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.