Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinL904_19170Not AvailableNegative1631652 - 163321755990.5
arac family transcriptional regulatorL904_19175Not AvailablePositive1634605 - 163548633227.5
type iv secretion protein virb11L904_19180Not AvailableNegative1635619 - 163662037069.4
type iv secretion protein virb10L904_19185Not AvailableNegative1636629 - 163780142547.3
type iv secretion protein virb9L904_19190Not AvailableNegative1637814 - 163866831367.1
conjugal transfer protein trajL904_19195Not AvailableNegative1638665 - 163927322282.4
hypothetical proteinL904_19200Not AvailableNegative1639340 - 16396069636.41
virb6 type iv secretion proteinL904_19205Not AvailableNegative1639643 - 164057833041.2
hypothetical proteinL904_19210Not AvailableNegative1640583 - 16408168445.1
virb5 type iv secretion proteinL904_19215Not AvailableNegative1640813 - 164151125477.2

Displaying genes 1741 – 1750 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.