Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. LY4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140381 bp
Thymine Count
1126363 bp
Guanine Count
1677813 bp
Cytosine Count
1697653 bp
Genome Length
5642210 bp
Protein-coding Genes
5200 genes
Non-Coding Genes
173 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase subunit beta | L904_18100 | Not Available | Positive | 1400762 - 1402318 | 54789.2 |
| formate dehydrogenase subunit alpha | L904_18105 | Not Available | Positive | 1402323 - 1405205 | 105396.0 |
| nad-dependent formate dehydrogenase subunit delta | L904_18110 | Not Available | Positive | 1405277 - 1405618 | 12261.6 |
| mfs transporter | L904_18115 | Not Available | Positive | 1405782 - 1407386 | 56593.3 |
| dihydrodipicolinate synthase | L904_18120 | Not Available | Negative | 1407478 - 1408374 | 31528.9 |
| calcium-binding protein | L904_18125 | Not Available | Negative | 1408406 - 1409287 | 31566.3 |
| gntr family transcriptional regulator | L904_18130 | Not Available | Negative | 1409346 - 1410065 | 26690.6 |
| hypothetical protein | L904_18135 | Not Available | Positive | 1410099 - 1410221 | 4438.56 |
| peptide abc transporter | L904_18140 | Not Available | Positive | 1410367 - 1412316 | 72342.9 |
| abc transporter permease | L904_18145 | Not Available | Positive | 1412437 - 1413423 | 36111.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
