Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
addiction module antitoxinL904_17850Not AvailablePositive1347175 - 134747411045.5
arac family transcriptional regulatorL904_17855Not AvailableNegative1347494 - 134836631614.0
hypothetical proteinL904_17860Not AvailableNegative1348398 - 13485023797.95
twin-arginine translocation pathway signal proteinL904_17865Not AvailablePositive1348501 - 134971543261.2
branched-chain amino acid abc transporter permeaseL904_17870Not AvailablePositive1349786 - 135065830732.8
abc transporter permeaseL904_17875Not AvailablePositive1350783 - 135156227989.4
abc transporterL904_17880Not AvailablePositive1351559 - 135228725472.3
amino acid abc transporter atpaseL904_17885Not AvailablePositive1352280 - 135300224917.4
salicylaldehyde dehydrogenaseL904_17890Not AvailablePositive1353019 - 135447049735.6
lysr family transcriptional regulatorL904_17895Not AvailableNegative1354494 - 135539033277.9

Displaying genes 1481 – 1490 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.