Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. LY4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140381 bp
Thymine Count
1126363 bp
Guanine Count
1677813 bp
Cytosine Count
1697653 bp
Genome Length
5642210 bp
Protein-coding Genes
5200 genes
Non-Coding Genes
173 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | L904_17800 | Not Available | Negative | 1335648 - 1336553 | 33082.7 |
| catalase-peroxidase | L904_17805 | Not Available | Positive | 1336804 - 1338936 | 77421.7 |
| hypothetical protein | L904_17810 | Not Available | Negative | 1339043 - 1339219 | 6123.08 |
| arac family transcriptional regulator | L904_17815 | Not Available | Positive | 1339456 - 1340331 | 32191.6 |
| ligand-gated channel | L904_17820 | Not Available | Negative | 1340526 - 1342646 | 77645.5 |
| abc transporter substrate-binding protein | L904_17825 | Not Available | Positive | 1342868 - 1343878 | 35814.9 |
| abc transporter permease | L904_17830 | Not Available | Positive | 1343875 - 1344918 | 34878.6 |
| abc transporter permease | L904_17835 | Not Available | Positive | 1344915 - 1345955 | 35685.1 |
| iron-dicitrate abc transporter atp-binding protein | L904_17840 | Not Available | Positive | 1345952 - 1346776 | 29712.0 |
| plasmid maintenance system killer protein | L904_17845 | Not Available | Positive | 1346838 - 1347119 | 10478.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
