Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. LY4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140381 bp
Thymine Count
1126363 bp
Guanine Count
1677813 bp
Cytosine Count
1697653 bp
Genome Length
5642210 bp
Protein-coding Genes
5200 genes
Non-Coding Genes
173 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyamine abc transporter permease | L904_17230 | Not Available | Negative | 1211024 - 1211902 | 31279.6 |
| spermidine/putrescine abc transporter atp-binding protein | L904_17235 | Not Available | Negative | 1211899 - 1212972 | 38503.6 |
| polyamine abc transporter substrate-binding protein | L904_17240 | Not Available | Negative | 1213248 - 1214288 | 37048.7 |
| 4-hydroxy-4-methyl-2-oxoglutarate aldolase | L904_17245 | Not Available | Negative | 1214351 - 1215016 | 23572.9 |
| carbon-nitrogen hydrolase | L904_17250 | Not Available | Negative | 1215032 - 1215814 | 28496.7 |
| lysr family transcriptional regulator | L904_17255 | Not Available | Negative | 1215962 - 1216870 | 32925.7 |
| amidohydrolase | L904_17260 | Not Available | Negative | 1217110 - 1217769 | 23884.7 |
| lysr family transcriptional regulator | L904_17265 | Not Available | Positive | 1217920 - 1218840 | 33129.9 |
| antibiotic biosynthesis monooxygenase | L904_17270 | Not Available | Negative | 1218876 - 1219229 | 12852.1 |
| lysr family transcriptional regulator | L904_17275 | Not Available | Positive | 1219357 - 1220244 | 32834.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
