Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. LY4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140381 bp
Thymine Count
1126363 bp
Guanine Count
1677813 bp
Cytosine Count
1697653 bp
Genome Length
5642210 bp
Protein-coding Genes
5200 genes
Non-Coding Genes
173 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein icmf | L904_17030 | Not Available | Positive | 1162696 - 1166175 | 128011.0 |
| serine/threonine phosphatase | L904_17035 | Not Available | Positive | 1166258 - 1167664 | 51149.9 |
| serine/threonine protein kinase | L904_17040 | Not Available | Positive | 1167651 - 1168556 | 33399.7 |
| capsule polysaccharide transporter | L904_17045 | Not Available | Negative | 1168568 - 1169683 | 38531.1 |
| photosystem reaction center subunit h | L904_17050 | Not Available | Positive | 1169979 - 1170275 | 10521.3 |
| short-chain dehydrogenase | L904_17055 | Not Available | Negative | 1170369 - 1171094 | 24939.2 |
| ribulokinase | L904_17060 | Not Available | Negative | 1171152 - 1172759 | 55980.4 |
| glucose dehydrogenase | L904_17065 | Not Available | Negative | 1172849 - 1173580 | 26260.8 |
| ribose abc transporter permease | L904_17070 | Not Available | Negative | 1173620 - 1174597 | 33020.9 |
| ribonucleotide-diphosphate reductase subunit alpha | L904_17075 | Not Available | Negative | 1174587 - 1176089 | 55285.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
