Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. LY4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140381 bp
Thymine Count
1126363 bp
Guanine Count
1677813 bp
Cytosine Count
1697653 bp
Genome Length
5642210 bp
Protein-coding Genes
5200 genes
Non-Coding Genes
173 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein | L904_16980 | Not Available | Positive | 1150085 - 1150942 | 30879.4 |
| type vi secretion protein | L904_16985 | Not Available | Positive | 1150983 - 1151519 | 20122.3 |
| evpb family type vi secretion protein | L904_16990 | Not Available | Positive | 1151619 - 1153100 | 55105.1 |
| type vi secretion protein | L904_16995 | Not Available | Positive | 1153156 - 1154550 | 50771.0 |
| nitrogen fixation virulence-island protein | L904_17000 | Not Available | Positive | 1154547 - 1155371 | 29969.2 |
| type vi secretion protein | L904_17005 | Not Available | Positive | 1155364 - 1155873 | 19103.9 |
| type vi secretion system protein impg | L904_17010 | Not Available | Positive | 1155866 - 1157647 | 65559.1 |
| type vi secretion protein | L904_17015 | Not Available | Positive | 1157657 - 1158661 | 36223.3 |
| forkhead-associated protein | L904_17020 | Not Available | Positive | 1158666 - 1159871 | 43699.6 |
| cell envelope biogenesis protein ompa | L904_17025 | Not Available | Positive | 1161362 - 1162699 | 48888.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
