Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinL904_16830Not AvailablePositive1113660 - 111453831560.8
laci family transcriptional regulatorL904_16835Not AvailableNegative1114554 - 111558237682.2
oxidoreductaseL904_16840Not AvailablePositive1115758 - 111675636084.3
sugar phosphate isomeraseL904_16845Not AvailablePositive1116769 - 111767133968.1
abc transporter substrate-binding proteinL904_16850Not AvailablePositive1117734 - 111896644849.5
sugar abc transporter permeaseL904_16855Not AvailablePositive1119078 - 111998033408.0
abc transporter permeaseL904_16860Not AvailablePositive1119977 - 112080430580.2
sugar abc transporter atp-binding proteinL904_16865Not AvailablePositive1120801 - 112188638707.8
hypothetical proteinL904_16870Not AvailablePositive1121941 - 11221627491.96
protein phosphataseL904_16875Not AvailableNegative1122182 - 112280823143.6

Displaying genes 1281 – 1290 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.