Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. LY4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140381 bp
Thymine Count
1126363 bp
Guanine Count
1677813 bp
Cytosine Count
1697653 bp
Genome Length
5642210 bp
Protein-coding Genes
5200 genes
Non-Coding Genes
173 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c biogenesis protein cych | L904_04805 | Not Available | Positive | 945533 - 946696 | 41491.8 |
| cytochrome c biogenesis protein ccda | L904_04810 | Not Available | Positive | 946693 - 947205 | 18019.5 |
| heme lyase subunit ccmf | L904_04815 | Not Available | Positive | 947202 - 949193 | 72174.4 |
| cytochrome c | L904_04820 | Not Available | Positive | 949232 - 949687 | 17105.8 |
| hypothetical protein | L904_04825 | Not Available | Negative | 949849 - 949953 | 3729.44 |
| serine peptidase | L904_04830 | Not Available | Positive | 950026 - 951411 | 48159.1 |
| xre family transcriptional regulator | L904_04835 | Not Available | Positive | 951677 - 952471 | 29700.1 |
| sensor histidine kinase | L904_04840 | Not Available | Positive | 952481 - 953890 | 50839.6 |
| thiol-disulfide oxidoreductase | L904_04845 | Not Available | Positive | 954082 - 954489 | 15592.9 |
| mlta-interacting mipa family protein | L904_04850 | Not Available | Negative | 954621 - 955484 | 30547.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
