Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methyl-accepting chemotaxis proteinL904_04275Not AvailablePositive853580 - 85593783630.2
lysr family transcriptional regulatorL904_04280Not AvailableNegative856178 - 85706531746.8
gcn5 family n-acetyltransferaseL904_04285Not AvailablePositive857084 - 85770422476.8
hypothetical proteinL904_04290Not AvailableNegative857709 - 85807112386.8
superoxide dismutaseL904_04295Not AvailablePositive858292 - 85889422575.4
phosphataseL904_04300Not AvailablePositive859160 - 86001131535.1
transcriptional regulatorL904_04305Not AvailableNegative860212 - 86091326125.6
threonine transporter rhtbL904_04310Not AvailablePositive861047 - 86167622202.0
cytochrome c556L904_04315Not AvailablePositive861795 - 86222914872.0
diacylglycerol kinaseL904_04320Not AvailablePositive862320 - 86324032658.4

Displaying genes 1051 – 1060 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.