Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488101_101771 | Not Available | Negative | 889949 - 890311 | 13639.2 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN04488101_101772 | Not Available | Positive | 890330 - 890902 | 20134.5 |
| hypothetical protein | SAMN04488101_101773 | Not Available | Negative | 891028 - 891579 | 19983.9 |
| hypothetical protein | SAMN04488101_101774 | Not Available | Positive | 891696 - 891857 | 6012.06 |
| acyl-coa thioester hydrolase | SAMN04488101_101775 | Not Available | Negative | 891858 - 892283 | 16645.1 |
| l-histidine carboxy-lyase (histamine-forming) | SAMN04488101_101776 | Not Available | Negative | 892474 - 893604 | 42304.9 |
| transcriptional regulator, asnc family | SAMN04488101_101777 | Not Available | Positive | 893755 - 894222 | 17462.4 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04488101_101778 | Not Available | Positive | 894346 - 895566 | 45497.8 |
| response regulator receiver domain-containing protein | SAMN04488101_101779 | Not Available | Positive | 895599 - 897170 | 58194.0 |
| pas domain s-box-containing protein | SAMN04488101_101780 | Not Available | Positive | 897260 - 899347 | 79817.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
