Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_12813 | Not Available | Negative | 6057162 - 6057521 | 13550.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_12814 | Not Available | Negative | 6057525 - 6058067 | 21215.4 |
| hypothetical protein | SAMN04488101_12815 | Not Available | Negative | 6058071 - 6058409 | 12121.5 |
| acetyltransferase (gnat) family protein | SAMN04488101_12816 | Not Available | Positive | 6058670 - 6059011 | 13262.1 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04488101_12817 | Not Available | Positive | 6059396 - 6059848 | 17478.9 |
| dna-binding transcriptional regulator, arsr family | SAMN04488101_12818 | Not Available | Positive | 6059829 - 6060152 | 12362.1 |
| hypothetical protein | SAMN04488101_12819 | Not Available | Positive | 6060182 - 6060952 | 28104.8 |
| hypothetical protein | SAMN04488101_12820 | Not Available | Positive | 6061002 - 6061562 | 21511.2 |
| integrase core domain-containing protein | SAMN04488101_1291 | Not Available | Positive | 6061563 - 6061828 | 10040.0 |
| predicted outer membrane protein | SAMN04488101_1292 | Not Available | Positive | 6062063 - 6062632 | 21670.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
