Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipocalin-like domain-containing protein | SAMN04488101_12614 | Not Available | Negative | 5999830 - 6000279 | 16933.4 |
| isopentenyl-diphosphate delta-isomerase | SAMN04488101_12615 | Not Available | Positive | 6000485 - 6001015 | 20246.1 |
| enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-coa reductase (nad+) | SAMN04488101_12616 | Not Available | Positive | 6001070 - 6002260 | 42742.3 |
| pyruvate carboxylase | SAMN04488101_12617 | Not Available | Positive | 6002448 - 6005891 | 129208.0 |
| mfs transporter, acs family, hexuronate transporter | SAMN04488101_12618 | Not Available | Positive | 6006298 - 6007737 | 53428.5 |
| acyl-coa reductase | SAMN04488101_12619 | Not Available | Positive | 6007771 - 6009396 | 60275.7 |
| hypothetical protein | SAMN04488101_12620 | Not Available | Negative | 6009414 - 6009872 | 17285.7 |
| phosphotransferase enzyme family protein | SAMN04488101_12621 | Not Available | Negative | 6009965 - 6010999 | 40013.5 |
| transcriptional regulator, laci family | SAMN04488101_12622 | Not Available | Negative | 6011076 - 6012098 | 38251.3 |
| predicted dehydrogenase | SAMN04488101_12623 | Not Available | Positive | 6012489 - 6013841 | 50335.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
