Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 5984816 - 5984903 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 5984964 - 5985039 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 5985078 - 5985165 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 5985233 - 5985308 | Not Available |
| regulatory protein | SAMN04488101_12532 | Not Available | Negative | 5985438 - 5985929 | 19178.4 |
| asma protein | SAMN04488101_12533 | Not Available | Negative | 5985976 - 5989059 | 113889.0 |
| hypothetical protein | SAMN04488101_12534 | Not Available | Negative | 5989157 - 5989669 | 19787.7 |
| hypothetical protein | SAMN04488101_1261 | Not Available | Positive | 5990156 - 5990763 | 22888.4 |
| dihydrofolate reductase | SAMN04488101_1262 | Not Available | Positive | 5990834 - 5991454 | 23378.8 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN04488101_1263 | Not Available | Negative | 5991509 - 5992027 | 19335.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
