Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fes assembly suf system protein | SAMN04488101_12518 | Not Available | Negative | 5969988 - 5970302 | 11843.5 |
| cysteine desulfuration protein sufe | SAMN04488101_12519 | Not Available | Negative | 5970295 - 5970747 | 16864.6 |
| cysteine desulfurase / selenocysteine lyase | SAMN04488101_12520 | Not Available | Negative | 5970747 - 5971961 | 44138.2 |
| iron-regulated abc transporter permease protein sufd | SAMN04488101_12521 | Not Available | Negative | 5971964 - 5973262 | 48585.7 |
| iron-regulated abc transporter atpase subunit sufc | SAMN04488101_12522 | Not Available | Negative | 5973286 - 5974053 | 28533.4 |
| iron-regulated abc transporter membrane component sufb | SAMN04488101_12523 | Not Available | Negative | 5974079 - 5975524 | 54020.4 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04488101_12524 | Not Available | Negative | 5975632 - 5976486 | 31163.1 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488101_12525 | Not Available | Negative | 5976529 - 5979549 | 108680.0 |
| starch-binding associating with outer membrane | SAMN04488101_12526 | Not Available | Negative | 5979824 - 5981299 | 54618.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_12527 | Not Available | Negative | 5981318 - 5984476 | 115158.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
