Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxypyruvate isomerase | SAMN04488101_12424 | Not Available | Negative | 5934815 - 5935753 | 34990.8 |
| thiamine biosynthesis lipoprotein | SAMN04488101_12425 | Not Available | Negative | 5935793 - 5936803 | 36792.9 |
| predicted dehydrogenase | SAMN04488101_12426 | Not Available | Negative | 5936810 - 5938129 | 49130.2 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN04488101_12427 | Not Available | Negative | 5938174 - 5939139 | 36451.7 |
| atp-dependent clp protease atp-binding subunit clpc | SAMN04488101_12428 | Not Available | Negative | 5939348 - 5941888 | 94579.3 |
| atp-binding cassette protein, chvd family | SAMN04488101_12429 | Not Available | Positive | 5942102 - 5943754 | 61754.5 |
| hypothetical protein | SAMN04488101_12430 | Not Available | Negative | 5943843 - 5944682 | 30575.7 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04488101_12431 | Not Available | Negative | 5944953 - 5945867 | 33636.2 |
| s-formylglutathione hydrolase frmb | SAMN04488101_12432 | Not Available | Negative | 5945983 - 5946771 | 29822.7 |
| hypothetical protein | SAMN04488101_12433 | Not Available | Negative | 5946913 - 5947131 | 8442.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
