Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_101461 | Not Available | Positive | 540623 - 540775 | 5771.12 |
| late embryogenesis abundant protein | SAMN04488101_101462 | Not Available | Positive | 540858 - 541478 | 22603.9 |
| glcnac-pi de-n-acetylase | SAMN04488101_101463 | Not Available | Positive | 541639 - 544098 | 90436.4 |
| transporter, sss family | SAMN04488101_101464 | Not Available | Positive | 544241 - 545944 | 63114.9 |
| protein of unknown function | SAMN04488101_101465 | Not Available | Negative | 546018 - 546866 | 31186.5 |
| aminopeptidase n | SAMN04488101_101466 | Not Available | Positive | 547013 - 549577 | 98018.6 |
| hypothetical protein | SAMN04488101_101467 | Not Available | Negative | 549579 - 550394 | 31141.2 |
| cytochrome bd-i ubiquinol oxidase subunit 1 apoprotein | SAMN04488101_101468 | Not Available | Positive | 550647 - 551981 | 49012.4 |
| cytochrome bd-i ubiquinol oxidase subunit 2 apoprotein | SAMN04488101_101469 | Not Available | Positive | 551978 - 553000 | 37281.9 |
| hypothetical protein | SAMN04488101_101470 | Not Available | Positive | 553176 - 554087 | 32094.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
