Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxyl-terminal processing protease | SAMN04488101_101421 | Not Available | Positive | 494903 - 496981 | 77316.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_101422 | Not Available | Positive | 497007 - 497555 | 21255.7 |
| fecr family protein | SAMN04488101_101423 | Not Available | Positive | 497562 - 498713 | 43361.3 |
| ahpc/tsa family protein | SAMN04488101_101424 | Not Available | Positive | 498813 - 500213 | 53784.3 |
| hypothetical protein | SAMN04488101_101425 | Not Available | Positive | 500192 - 502774 | 97603.2 |
| peroxiredoxin | SAMN04488101_101426 | Not Available | Positive | 502785 - 503915 | 41368.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_101427 | Not Available | Positive | 503943 - 507518 | 131190.0 |
| susd family protein | SAMN04488101_101428 | Not Available | Positive | 507528 - 508964 | 53993.1 |
| hypothetical protein | SAMN04488101_101429 | Not Available | Positive | 508975 - 509808 | 31173.3 |
| peroxiredoxin | SAMN04488101_101430 | Not Available | Positive | 509860 - 511767 | 70752.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
