Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488101_1121 | Not Available | Negative | 4478273 - 4478917 | 25014.2 |
| hypothetical protein | SAMN04488101_1122 | Not Available | Negative | 4479162 - 4479965 | 30363.0 |
| hypothetical protein | SAMN04488101_1123 | Not Available | Negative | 4480190 - 4481101 | 34405.3 |
| oxygenase, catalysing oxidative methylation of damaged dna | SAMN04488101_1124 | Not Available | Negative | 4481295 - 4481576 | 11056.3 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488101_1125 | Not Available | Negative | 4481576 - 4482328 | 26917.4 |
| regulatory protein, luxr family | SAMN04488101_1126 | Not Available | Negative | 4482534 - 4483298 | 29305.8 |
| hypothetical protein | SAMN04488101_1127 | Not Available | Positive | 4483498 - 4484940 | 55169.0 |
| hypothetical protein | SAMN04488101_1128 | Not Available | Positive | 4484937 - 4494092 | 348305.0 |
| hypothetical protein | SAMN04488101_1129 | Not Available | Positive | 4494104 - 4495036 | 33952.5 |
| ntp pyrophosphatase, house-cleaning of non-canonical ntps | SAMN04488101_11210 | Not Available | Positive | 4495238 - 4495567 | 12612.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
