Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 4326192 - 4326267 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 4326349 - 4326423 | Not Available |
| elongation factor tu | SAMN04488101_11133 | Not Available | Positive | 4326539 - 4327726 | 43015.9 |
| Trna-trp | Not Available | Not Available | Positive | 4327839 - 4327912 | Not Available |
| preprotein translocase subunit sece | SAMN04488101_11135 | Not Available | Positive | 4327923 - 4328120 | 7307.94 |
| transcription antitermination protein nusg | SAMN04488101_11136 | Not Available | Positive | 4328130 - 4328672 | 20595.2 |
| lsu ribosomal protein l11p | SAMN04488101_11137 | Not Available | Positive | 4328762 - 4329205 | 15550.9 |
| large subunit ribosomal protein l1 | SAMN04488101_11138 | Not Available | Positive | 4329229 - 4329927 | 24505.9 |
| lsu ribosomal protein l10p | SAMN04488101_11139 | Not Available | Positive | 4329930 - 4330451 | 18710.6 |
| lsu ribosomal protein l12p | SAMN04488101_11140 | Not Available | Positive | 4330514 - 4330888 | 12796.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
