Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_11121 | Not Available | Negative | 4319549 - 4319686 | 5261.46 |
| acyl-coa dehydrogenase | SAMN04488101_11122 | Not Available | Positive | 4319769 - 4320941 | 42502.1 |
| hypothetical protein | SAMN04488101_11123 | Not Available | Negative | 4321020 - 4321391 | 14141.3 |
| small subunit ribosomal protein s21 | SAMN04488101_11124 | Not Available | Positive | 4321547 - 4321741 | 7549.43 |
| signal transduction histidine kinase | SAMN04488101_11125 | Not Available | Negative | 4321797 - 4323599 | 68646.2 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488101_11126 | Not Available | Negative | 4323612 - 4324208 | 22740.5 |
| integrase/recombinase xerc | SAMN04488101_11127 | Not Available | Positive | 4324506 - 4325390 | 33472.8 |
| putative sigma-54 modulation protein | SAMN04488101_11128 | Not Available | Positive | 4325406 - 4325753 | 13341.1 |
| Trna-thr | Not Available | Not Available | Positive | 4325960 - 4326032 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 4326074 - 4326159 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
