Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_11111 | Not Available | Positive | 4307101 - 4307391 | 10908.3 |
| cell division protein zapa | SAMN04488101_11112 | Not Available | Positive | 4307423 - 4307713 | 11058.2 |
| ribonucrease y | SAMN04488101_11113 | Not Available | Positive | 4308071 - 4309636 | 58573.0 |
| uncharacterized membrane protein ygl010w | SAMN04488101_11114 | Not Available | Positive | 4309721 - 4310245 | 20247.2 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488101_11115 | Not Available | Positive | 4310359 - 4313178 | 104588.0 |
| hypothetical protein | SAMN04488101_11116 | Not Available | Positive | 4313275 - 4314492 | 42457.7 |
| hypothetical protein | SAMN04488101_11117 | Not Available | Negative | 4314587 - 4315789 | 47134.6 |
| putative hemolysin | SAMN04488101_11118 | Not Available | Negative | 4316003 - 4317754 | 66777.7 |
| competence protein comea helix-hairpin-helix repeat region | SAMN04488101_11119 | Not Available | Positive | 4318114 - 4319022 | 34937.9 |
| adenine phosphoribosyltransferase | SAMN04488101_11120 | Not Available | Positive | 4319025 - 4319552 | 18957.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
