Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase core domain-containing protein | SAMN04488101_1111 | Not Available | Positive | 4295291 - 4295577 | 11117.4 |
| transcriptional regulator, lyttr family | SAMN04488101_1112 | Not Available | Positive | 4295786 - 4296682 | 34350.0 |
| tonb-dependent receptor plug domain | SAMN04488101_1113 | Not Available | Positive | 4296771 - 4299521 | 100571.0 |
| parallel beta-helix repeat-containing protein | SAMN04488101_1114 | Not Available | Positive | 4299523 - 4300806 | 46559.2 |
| conserved hypothetical protein, hne_0200 family | SAMN04488101_1115 | Not Available | Positive | 4300818 - 4301885 | 39327.2 |
| formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase | SAMN04488101_1116 | Not Available | Negative | 4301895 - 4302473 | 22002.6 |
| superoxide dismutase, fe-mn family | SAMN04488101_1117 | Not Available | Positive | 4302553 - 4303365 | 30150.0 |
| ssu ribosomal protein s20p | SAMN04488101_1118 | Not Available | Positive | 4303587 - 4303841 | 9672.1 |
| dna replication and repair protein radc | SAMN04488101_1119 | Not Available | Positive | 4303871 - 4304620 | 27746.8 |
| phenylalanyl-trna synthetase beta subunit | SAMN04488101_11110 | Not Available | Positive | 4304681 - 4307080 | 87894.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
