Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_110125 | Not Available | Positive | 4250392 - 4251000 | 22580.0 |
| peptidyl-prolyl cis-trans isomerase d | SAMN04488101_110126 | Not Available | Positive | 4251073 - 4253169 | 75959.4 |
| protein of unknown function | SAMN04488101_110127 | Not Available | Positive | 4253243 - 4253758 | 19250.3 |
| protein of unknown function | SAMN04488101_110128 | Not Available | Positive | 4253787 - 4254563 | 29489.0 |
| protein of unknown function | SAMN04488101_110129 | Not Available | Positive | 4254596 - 4255162 | 20981.0 |
| glucose-1-phosphate thymidylyltransferase | SAMN04488101_110130 | Not Available | Positive | 4255281 - 4256066 | 28854.8 |
| mfs transporter, fhs family, l-fucose permease | SAMN04488101_110131 | Not Available | Positive | 4256393 - 4257649 | 45482.0 |
| l-rhamnose mutarotase | SAMN04488101_110132 | Not Available | Positive | 4257642 - 4257980 | 13199.0 |
| altronate hydrolase | SAMN04488101_110133 | Not Available | Positive | 4257980 - 4259638 | 59962.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488101_110134 | Not Available | Positive | 4259648 - 4260412 | 26493.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
