Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane transport energization protein tonb | SAMN04488101_11075 | Not Available | Positive | 4200324 - 4201145 | 29848.2 |
| hypothetical protein | SAMN04488101_11076 | Not Available | Positive | 4201148 - 4201378 | 8913.46 |
| phosphate abc transporter substrate-binding protein, phot family | SAMN04488101_11077 | Not Available | Positive | 4201365 - 4202273 | 33709.9 |
| tetratricopeptide repeat-containing protein | SAMN04488101_11078 | Not Available | Positive | 4202386 - 4204110 | 64180.3 |
| nadh dehydrogenase subunit a | SAMN04488101_11079 | Not Available | Positive | 4204187 - 4204558 | 14116.9 |
| nadh dehydrogenase subunit b | SAMN04488101_11080 | Not Available | Positive | 4204665 - 4205207 | 19619.8 |
| nadh dehydrogenase subunit c | SAMN04488101_11081 | Not Available | Positive | 4205207 - 4205710 | 19337.3 |
| nadh dehydrogenase subunit d | SAMN04488101_11082 | Not Available | Positive | 4205717 - 4206931 | 46324.5 |
| nadh dehydrogenase subunit e | SAMN04488101_11083 | Not Available | Positive | 4206924 - 4207439 | 19208.3 |
| nadh dehydrogenase subunit f | SAMN04488101_11084 | Not Available | Positive | 4207469 - 4208833 | 49179.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
