Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 88 | SAMN04488101_11064 | Not Available | Positive | 4190114 - 4191310 | 45447.1 |
| hypothetical protein | SAMN04488101_11065 | Not Available | Positive | 4191320 - 4192579 | 47017.5 |
| hypothetical protein | SAMN04488101_11066 | Not Available | Negative | 4192658 - 4193005 | 13167.5 |
| methionine adenosyltransferase | SAMN04488101_11067 | Not Available | Negative | 4193450 - 4194700 | 45965.6 |
| lipid kinase, yegs/rv2252/bmru family | SAMN04488101_11069 | Not Available | Positive | 4194933 - 4195823 | 32292.3 |
| translation initiation factor 1 | SAMN04488101_11070 | Not Available | Positive | 4195813 - 4196166 | 12794.5 |
| phosphoenolpyruvate carboxykinase (atp) | SAMN04488101_11071 | Not Available | Positive | 4196311 - 4197915 | 59220.4 |
| outer membrane transport energization protein exbb | SAMN04488101_11072 | Not Available | Positive | 4198193 - 4199032 | 29773.6 |
| outer membrane transport energization protein exbd | SAMN04488101_11073 | Not Available | Positive | 4199118 - 4199735 | 22720.7 |
| outer membrane transport energization protein exbd | SAMN04488101_11074 | Not Available | Positive | 4199748 - 4200290 | 19574.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
