Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488101_11054 | Not Available | Positive | 4172433 - 4174064 | 58790.4 |
| protein of unknown function | SAMN04488101_11055 | Not Available | Positive | 4174054 - 4175844 | 65407.0 |
| peptidase m60, enhancin and enhancin-like | SAMN04488101_11056 | Not Available | Positive | 4175858 - 4177312 | 54450.9 |
| concanavalin a-like lectin/glucanases superfamily protein | SAMN04488101_11057 | Not Available | Positive | 4177335 - 4179089 | 64432.3 |
| hypothetical protein | SAMN04488101_11058 | Not Available | Positive | 4179114 - 4181432 | 83433.3 |
| glycosyl hydrolase family 20, domain 2 | SAMN04488101_11059 | Not Available | Positive | 4181561 - 4182226 | 25206.1 |
| glycosyl hydrolase family 20, catalytic domain | SAMN04488101_11060 | Not Available | Positive | 4182231 - 4183190 | 36950.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_11061 | Not Available | Positive | 4183313 - 4186645 | 123195.0 |
| starch-binding associating with outer membrane | SAMN04488101_11062 | Not Available | Positive | 4186731 - 4188497 | 66759.1 |
| alpha-l-fucosidase | SAMN04488101_11063 | Not Available | Positive | 4188554 - 4190056 | 57143.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
