Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system permease protein | SAMN04488101_11044 | Not Available | Positive | 4154752 - 4155435 | 25018.3 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN04488101_11045 | Not Available | Positive | 4155438 - 4156223 | 30691.8 |
| signal transduction histidine kinase | SAMN04488101_11046 | Not Available | Negative | 4156218 - 4160318 | 154547.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_11047 | Not Available | Positive | 4160584 - 4163577 | 111784.0 |
| starch-binding associating with outer membrane | SAMN04488101_11048 | Not Available | Positive | 4163586 - 4165115 | 57002.9 |
| fasciclin domain-containing protein | SAMN04488101_11049 | Not Available | Positive | 4165123 - 4165794 | 25160.1 |
| protein of unknown function | SAMN04488101_11050 | Not Available | Positive | 4165819 - 4166850 | 38761.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_11051 | Not Available | Positive | 4166847 - 4170083 | 118990.0 |
| starch-binding associating with outer membrane | SAMN04488101_11052 | Not Available | Positive | 4170096 - 4171649 | 59374.8 |
| fasciclin domain-containing protein | SAMN04488101_11053 | Not Available | Positive | 4171674 - 4172414 | 27845.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
