Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase | SAMN04488101_11024 | Not Available | Positive | 4130834 - 4132192 | 51056.2 |
| iron-containing alcohol dehydrogenase | SAMN04488101_11025 | Not Available | Positive | 4132212 - 4133360 | 41960.7 |
| putative glutamine amidotransferase | SAMN04488101_11026 | Not Available | Positive | 4133398 - 4134114 | 27148.2 |
| acyl-coa reductase | SAMN04488101_11027 | Not Available | Positive | 4134111 - 4135475 | 50806.7 |
| anhydro-n-acetylmuramic acid kinase | SAMN04488101_11028 | Not Available | Positive | 4135560 - 4136756 | 43441.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_11029 | Not Available | Positive | 4136837 - 4139974 | 113562.0 |
| starch-binding associating with outer membrane | SAMN04488101_11030 | Not Available | Positive | 4139992 - 4141308 | 46971.6 |
| transcriptional regulator, deor family | SAMN04488101_11031 | Not Available | Negative | 4141423 - 4142169 | 27599.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_11032 | Not Available | Positive | 4142412 - 4145492 | 111993.0 |
| starch-binding associating with outer membrane | SAMN04488101_11033 | Not Available | Positive | 4145508 - 4147076 | 58888.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
