Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | SAMN04488101_11014 | Not Available | Positive | 4114685 - 4115098 | 15850.7 |
| gtp cyclohydrolase i | SAMN04488101_11015 | Not Available | Positive | 4115107 - 4115742 | 24023.9 |
| [acyl-carrier-protein] s-malonyltransferase | SAMN04488101_11016 | Not Available | Positive | 4115838 - 4116719 | 31438.1 |
| hamp domain-containing protein | SAMN04488101_11017 | Not Available | Positive | 4116748 - 4120470 | 141938.0 |
| hypothetical protein | SAMN04488101_11018 | Not Available | Negative | 4120462 - 4121370 | 34299.8 |
| uncharacterized lipoprotein yddw, upf0748 family | SAMN04488101_11019 | Not Available | Positive | 4121545 - 4123104 | 58864.1 |
| zinc protease | SAMN04488101_11020 | Not Available | Negative | 4123216 - 4126077 | 105846.0 |
| predicted acyltransferase | SAMN04488101_11021 | Not Available | Negative | 4126175 - 4127332 | 42986.4 |
| glucosamine-6-phosphate deaminase | SAMN04488101_11022 | Not Available | Negative | 4127401 - 4129323 | 72455.5 |
| ethanolamine permease | SAMN04488101_11023 | Not Available | Positive | 4129521 - 4130837 | 47319.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
