Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase (nad+) | SAMN04488101_1104 | Not Available | Negative | 4105398 - 4106933 | 55271.3 |
| tetratricopeptide repeat-containing protein | SAMN04488101_1105 | Not Available | Positive | 4107219 - 4108622 | 55126.4 |
| phosphosulfolactate synthase | SAMN04488101_1106 | Not Available | Positive | 4108687 - 4109454 | 28770.6 |
| shikimate dehydrogenase | SAMN04488101_1107 | Not Available | Positive | 4109481 - 4110221 | 27758.3 |
| gliding motility-associated lipoprotein gldd | SAMN04488101_1108 | Not Available | Positive | 4110223 - 4110807 | 22687.8 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04488101_1109 | Not Available | Positive | 4110829 - 4111467 | 23830.4 |
| lipoprotein-releasing system permease protein | SAMN04488101_11010 | Not Available | Positive | 4111486 - 4112721 | 45680.2 |
| hypothetical protein | SAMN04488101_11011 | Not Available | Positive | 4112726 - 4113103 | 14135.9 |
| 1,4-dihydroxy-6-naphthoate synthase | SAMN04488101_11012 | Not Available | Negative | 4113100 - 4113945 | 31871.4 |
| futalosine hydrolase | SAMN04488101_11013 | Not Available | Negative | 4113980 - 4114612 | 22941.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
