Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr hth family regulatory protein | SAMN04488101_109164 | Not Available | Negative | 4090343 - 4090633 | 11412.8 |
| curved dna-binding protein | SAMN04488101_109165 | Not Available | Negative | 4090645 - 4091574 | 34244.4 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN04488101_109166 | Not Available | Negative | 4091660 - 4092928 | 46441.9 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04488101_109167 | Not Available | Positive | 4093115 - 4094404 | 48205.7 |
| heat repeat | SAMN04488101_109168 | Not Available | Positive | 4094455 - 4097883 | 123677.0 |
| oxidoreductase family, nad-binding rossmann fold | SAMN04488101_109169 | Not Available | Positive | 4097920 - 4099377 | 53927.5 |
| predicted dehydrogenase | SAMN04488101_109170 | Not Available | Positive | 4099396 - 4100189 | 28957.9 |
| transposase (or an inactivated derivative) | SAMN04488101_1101 | Not Available | Negative | 4100250 - 4101473 | 46918.3 |
| helicase conserved c-terminal domain-containing protein | SAMN04488101_1102 | Not Available | Negative | 4101537 - 4104431 | 112039.0 |
| hypothetical protein | SAMN04488101_1103 | Not Available | Positive | 4104676 - 4105320 | 23455.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
