Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_109154 | Not Available | Negative | 4071830 - 4073380 | 56466.2 |
| cd2+/zn2+-exporting atpase | SAMN04488101_109155 | Not Available | Negative | 4073492 - 4075471 | 71096.8 |
| rnd family efflux transporter, mfp subunit | SAMN04488101_109156 | Not Available | Negative | 4075531 - 4076823 | 46403.2 |
| cobalt-zinc-cadmium resistance protein czca | SAMN04488101_109157 | Not Available | Negative | 4076828 - 4081192 | 160164.0 |
| hypothetical protein | SAMN04488101_109158 | Not Available | Negative | 4081282 - 4081605 | 11868.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_109159 | Not Available | Positive | 4081838 - 4082353 | 20034.6 |
| fecr family protein | SAMN04488101_109160 | Not Available | Positive | 4082417 - 4083370 | 35297.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_109161 | Not Available | Positive | 4083500 - 4086859 | 121695.0 |
| starch-binding associating with outer membrane | SAMN04488101_109162 | Not Available | Positive | 4086879 - 4088402 | 57064.6 |
| alkaline phosphatase | SAMN04488101_109163 | Not Available | Positive | 4088475 - 4090346 | 69503.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
