Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase 2 | SAMN04488101_109144 | Not Available | Positive | 4054391 - 4056862 | 91623.0 |
| alpha-l-fucosidase 2 | SAMN04488101_109145 | Not Available | Positive | 4056864 - 4059464 | 95739.9 |
| alpha-d-xyloside xylohydrolase | SAMN04488101_109146 | Not Available | Positive | 4059478 - 4061625 | 80480.1 |
| alginate lyase | SAMN04488101_109147 | Not Available | Positive | 4061635 - 4062819 | 44788.8 |
| alpha-l-fucosidase | SAMN04488101_109148 | Not Available | Positive | 4062838 - 4064709 | 69716.1 |
| glycosyl hydrolase family 88 | SAMN04488101_109149 | Not Available | Positive | 4064735 - 4066054 | 49316.4 |
| alpha-l-fucosidase | SAMN04488101_109150 | Not Available | Positive | 4066149 - 4067588 | 53870.4 |
| right handed beta helix region | SAMN04488101_109151 | Not Available | Positive | 4067594 - 4069120 | 56982.6 |
| lysophospholipase l1 | SAMN04488101_109152 | Not Available | Positive | 4069354 - 4070778 | 52565.7 |
| trans-aconitate 2-methyltransferase | SAMN04488101_109153 | Not Available | Negative | 4070823 - 4071584 | 29397.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
