Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose 1-epimerase | SAMN04488101_109134 | Not Available | Positive | 4033739 - 4034890 | 41775.3 |
| signal transduction histidine kinase | SAMN04488101_109135 | Not Available | Positive | 4035050 - 4039132 | 155512.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_109136 | Not Available | Positive | 4039288 - 4039866 | 22508.6 |
| fecr family protein | SAMN04488101_109137 | Not Available | Positive | 4039941 - 4041107 | 42508.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_109138 | Not Available | Positive | 4041314 - 4044817 | 129464.0 |
| starch-binding associating with outer membrane | SAMN04488101_109139 | Not Available | Positive | 4044829 - 4046292 | 54681.4 |
| hypothetical protein | SAMN04488101_109140 | Not Available | Positive | 4046305 - 4048599 | 85834.7 |
| alpha-l-fucosidase | SAMN04488101_109141 | Not Available | Positive | 4048670 - 4050538 | 70702.1 |
| transcriptional regulator, arac family | SAMN04488101_109142 | Not Available | Positive | 4050862 - 4051740 | 33595.5 |
| beta-galactosidase | SAMN04488101_109143 | Not Available | Positive | 4051916 - 4054381 | 93108.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
