Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialate o-acetylesterase | SAMN04488101_109124 | Not Available | Positive | 4019444 - 4020895 | 53057.7 |
| hypothetical protein | SAMN04488101_109125 | Not Available | Positive | 4020907 - 4023213 | 87256.2 |
| unsaturated rhamnogalacturonyl hydrolase | SAMN04488101_109126 | Not Available | Positive | 4023311 - 4025224 | 72216.0 |
| l-fucose dehydrogenase | SAMN04488101_109127 | Not Available | Positive | 4025239 - 4026027 | 27865.5 |
| 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase | SAMN04488101_109128 | Not Available | Positive | 4026056 - 4027072 | 36535.4 |
| solute:na+ symporter, sss family | SAMN04488101_109129 | Not Available | Negative | 4027157 - 4028842 | 61209.3 |
| l-arabinose isomerase | SAMN04488101_109130 | Not Available | Negative | 4028852 - 4030342 | 55385.2 |
| l-ribulose 5-phosphate 4-epimerase | SAMN04488101_109131 | Not Available | Negative | 4030373 - 4031071 | 25935.9 |
| l-ribulokinase | SAMN04488101_109132 | Not Available | Negative | 4031104 - 4032807 | 62174.2 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04488101_109133 | Not Available | Negative | 4032896 - 4033618 | 28027.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
