Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN04488101_109114 | Not Available | Positive | 4005192 - 4006427 | 46119.7 |
| predicted dehydrogenase | SAMN04488101_109115 | Not Available | Positive | 4006434 - 4007513 | 40440.1 |
| acyl dehydratase | SAMN04488101_109116 | Not Available | Positive | 4007535 - 4007975 | 16794.1 |
| mfs transporter, fhs family, l-fucose permease | SAMN04488101_109117 | Not Available | Positive | 4008020 - 4009333 | 47311.9 |
| f5/8 type c domain | SAMN04488101_109118 | Not Available | Positive | 4009334 - 4012723 | 125370.0 |
| hypothetical protein | SAMN04488101_109119 | Not Available | Positive | 4012760 - 4014808 | 76962.7 |
| ribulose-bisphosphate carboxylase large chain | SAMN04488101_109120 | Not Available | Positive | 4014816 - 4016063 | 44851.7 |
| uncharacterized conserved protein ygbk, duf1537 family | SAMN04488101_109121 | Not Available | Positive | 4016069 - 4017466 | 50115.0 |
| asp/glu/hydantoin racemase | SAMN04488101_109122 | Not Available | Positive | 4017475 - 4018137 | 23249.4 |
| bile acid:na+ symporter, bass family | SAMN04488101_109123 | Not Available | Positive | 4018144 - 4019457 | 47919.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
