Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialate o-acetylesterase | SAMN04488101_10994 | Not Available | Positive | 3972104 - 3973573 | 54343.6 |
| beta-galactosidase/beta-glucuronidase | SAMN04488101_10995 | Not Available | Positive | 3973589 - 3976357 | 104678.0 |
| alpha-l-rhamnosidase | SAMN04488101_10996 | Not Available | Positive | 3976425 - 3979163 | 102745.0 |
| predicted neuraminidase (sialidase) | SAMN04488101_10997 | Not Available | Positive | 3979176 - 3980306 | 41722.2 |
| acetyl xylan esterase (axe1) | SAMN04488101_10998 | Not Available | Positive | 3980309 - 3981712 | 52301.3 |
| sugar phosphate isomerase/epimerase | SAMN04488101_10999 | Not Available | Positive | 3981709 - 3982605 | 33424.8 |
| protein of unknown function | SAMN04488101_109100 | Not Available | Positive | 3982616 - 3985162 | 94745.8 |
| predicted dehydrogenase | SAMN04488101_109101 | Not Available | Positive | 3985172 - 3986257 | 40895.4 |
| solute:na+ symporter, sss family | SAMN04488101_109102 | Not Available | Positive | 3986298 - 3987887 | 58480.2 |
| alpha-l-rhamnosidase | SAMN04488101_109103 | Not Available | Positive | 3987899 - 3990073 | 82889.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
