Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488101_10974 | Not Available | Positive | 3937111 - 3937911 | 27760.6 |
| hypothetical protein | SAMN04488101_10975 | Not Available | Positive | 3938009 - 3938533 | 19922.9 |
| subtilase family protein | SAMN04488101_10976 | Not Available | Positive | 3938623 - 3939963 | 48740.1 |
| hypothetical protein | SAMN04488101_10977 | Not Available | Positive | 3940247 - 3942991 | 103718.0 |
| hypothetical protein | SAMN04488101_10978 | Not Available | Positive | 3942991 - 3944538 | 59459.4 |
| polygalacturonase | SAMN04488101_10979 | Not Available | Positive | 3944560 - 3946164 | 58931.6 |
| alpha-l-fucosidase 2 | SAMN04488101_10980 | Not Available | Positive | 3946182 - 3949004 | 104186.0 |
| protein of unknown function | SAMN04488101_10981 | Not Available | Positive | 3949001 - 3952528 | 132684.0 |
| transcriptional regulator, arac family | SAMN04488101_10982 | Not Available | Negative | 3952548 - 3953420 | 33658.6 |
| hypothetical protein | SAMN04488101_10983 | Not Available | Positive | 3953662 - 3953805 | 5476.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
