Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin iii | SAMN04488101_10944 | Not Available | Negative | 3900844 - 3901482 | 23626.9 |
| hypothetical protein | SAMN04488101_10945 | Not Available | Negative | 3901564 - 3901977 | 15326.2 |
| hypothetical protein | SAMN04488101_10946 | Not Available | Negative | 3901981 - 3902538 | 19948.9 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04488101_10947 | Not Available | Negative | 3902566 - 3903996 | 52589.9 |
| hypothetical protein | SAMN04488101_10948 | Not Available | Negative | 3904075 - 3904869 | 28154.9 |
| crp/fnr family transcriptional regulator, anaerobic regulatory protein | SAMN04488101_10949 | Not Available | Negative | 3904940 - 3905584 | 25005.6 |
| small multidrug resistance pump | SAMN04488101_10950 | Not Available | Negative | 3905589 - 3905924 | 12096.4 |
| signal transduction histidine kinase | SAMN04488101_10951 | Not Available | Negative | 3905966 - 3907789 | 69349.6 |
| pp_03246 | SAMN04488101_10952 | Not Available | Positive | 3907900 - 3908481 | Not Available |
| dna-binding beta-propeller fold protein ynce | SAMN04488101_10953 | Not Available | Negative | 3908478 - 3909605 | 41705.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
