Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate binding module (family 6) | SAMN04488101_10924 | Not Available | Positive | 3874752 - 3877487 | 103495.0 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04488101_10925 | Not Available | Positive | 3877492 - 3879003 | 55276.1 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04488101_10926 | Not Available | Positive | 3879013 - 3879951 | 35764.4 |
| uncharacterized membrane protein | SAMN04488101_10927 | Not Available | Positive | 3879964 - 3881370 | 50968.6 |
| carbonic anhydrase | SAMN04488101_10928 | Not Available | Negative | 3881389 - 3882150 | 27570.5 |
| hypothetical protein | SAMN04488101_10929 | Not Available | Negative | 3882295 - 3882723 | 16708.2 |
| hypothetical protein | SAMN04488101_10930 | Not Available | Positive | 3882903 - 3883310 | 14906.5 |
| hypothetical protein | SAMN04488101_10931 | Not Available | Negative | 3883316 - 3883798 | 18088.9 |
| hypothetical protein | SAMN04488101_10932 | Not Available | Negative | 3883807 - 3884160 | 13767.0 |
| dihydrofolate reductase | SAMN04488101_10933 | Not Available | Negative | 3884221 - 3884805 | 21927.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
