Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diadenosine tetraphosphate (ap4a) hydrolase | SAMN04488101_10914 | Not Available | Negative | 3863247 - 3863672 | 15965.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_10915 | Not Available | Positive | 3863840 - 3864409 | 22174.7 |
| fecr family protein | SAMN04488101_10916 | Not Available | Positive | 3864502 - 3865629 | 42197.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_10917 | Not Available | Positive | 3865803 - 3869279 | 128228.0 |
| susd family protein | SAMN04488101_10918 | Not Available | Positive | 3869302 - 3870837 | 57993.8 |
| fasciclin domain-containing protein | SAMN04488101_10919 | Not Available | Positive | 3870824 - 3871501 | 25800.2 |
| protein of unknown function | SAMN04488101_10920 | Not Available | Positive | 3871520 - 3872497 | 36172.5 |
| hypothetical protein | SAMN04488101_10921 | Not Available | Negative | 3872566 - 3872907 | 13206.5 |
| protein of unknown function (4846) | SAMN04488101_10922 | Not Available | Negative | 3873015 - 3873791 | 29562.5 |
| polyisoprenoid-binding protein ycei | SAMN04488101_10923 | Not Available | Positive | 3873991 - 3874584 | 20678.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
