Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ectoine hydroxylase-related dioxygenase, phytanoyl-coa dioxygenase (phyh) family | SAMN04488101_108237 | Not Available | Negative | 3837334 - 3838218 | 33109.8 |
| mfs transporter, sp family, arabinose:h+ symporter | SAMN04488101_108238 | Not Available | Negative | 3838249 - 3839595 | 49300.6 |
| arac-type dna-binding protein | SAMN04488101_108239 | Not Available | Positive | 3839895 - 3840755 | 33082.7 |
| hypothetical protein | SAMN04488101_108240 | Not Available | Negative | 3840744 - 3842957 | 84156.6 |
| hypothetical protein | SAMN04488101_108241 | Not Available | Negative | 3842960 - 3845305 | 86340.5 |
| phage integrase family protein | SAMN04488101_108242 | Not Available | Positive | 3845505 - 3845768 | 9925.27 |
| orf6n domain-containing protein | SAMN04488101_108243 | Not Available | Positive | 3845815 - 3846378 | 21924.7 |
| integrase core domain-containing protein | SAMN04488101_1091 | Not Available | Negative | 3846652 - 3846858 | 7724.13 |
| integrase core domain-containing protein | SAMN04488101_1092 | Not Available | Negative | 3846898 - 3847494 | 23628.1 |
| hypothetical protein | SAMN04488101_1093 | Not Available | Negative | 3847491 - 3847859 | 13824.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
