Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_108227 | Not Available | Negative | 3824169 - 3824630 | 17700.1 |
| protein of unknown function | SAMN04488101_108228 | Not Available | Negative | 3825189 - 3826172 | 36266.0 |
| protein of unknown function | SAMN04488101_108229 | Not Available | Negative | 3826293 - 3827483 | 44080.6 |
| starch-binding associating with outer membrane | SAMN04488101_108230 | Not Available | Negative | 3827503 - 3829401 | 71513.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_108231 | Not Available | Negative | 3829439 - 3832879 | 126886.0 |
| hypothetical protein | SAMN04488101_108232 | Not Available | Negative | 3832928 - 3833056 | 4741.77 |
| fecr family protein | SAMN04488101_108233 | Not Available | Negative | 3833010 - 3834191 | 44723.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_108234 | Not Available | Negative | 3834264 - 3834824 | 21660.8 |
| hypothetical protein | SAMN04488101_108235 | Not Available | Negative | 3835082 - 3835309 | 8065.99 |
| right handed beta helix region | SAMN04488101_108236 | Not Available | Negative | 3835375 - 3837333 | 72766.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
